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PDBsum entry 5nqw
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Pore analysis for: 5nqw calculated with  MOLE 2.0
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PDB id
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5nqw
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
3.18 |
33.0 |
0.12 |
-0.02 |
17.9 |
86 |
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4 |
2 |
1 |
7 |
0 |
0 |
0 |
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2 |
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1.34 |
3.00 |
38.5 |
-1.45 |
-0.71 |
19.1 |
88 |
3 |
3 |
1 |
1 |
0 |
0 |
0 |
NAG 2 E BMA 3 E MAN 4 E MAN 5 E MAN 6 E
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3 |
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2.29 |
2.43 |
46.9 |
-1.71 |
-0.37 |
20.2 |
78 |
4 |
5 |
4 |
4 |
3 |
0 |
0 |
BMA 3 E MAN 7 E NAG 1 F NAG 2 F BMA 3 F MAN 4 F M
AN 5 F MAN 6 F MAN 7 F
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4 |
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1.35 |
3.00 |
50.5 |
-1.53 |
-0.29 |
19.4 |
82 |
5 |
4 |
2 |
2 |
2 |
0 |
0 |
NAG 2 E BMA 3 E MAN 4 E MAN 5 E MAN 6 E MAN 7 E N
AG 1 F
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5 |
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1.96 |
2.12 |
53.3 |
-1.95 |
-0.51 |
18.7 |
81 |
6 |
6 |
5 |
0 |
3 |
0 |
0 |
NAG 1 E NAG 2 E BMA 3 E MAN 5 E MAN 7 E BMA 3 F M
AN 7 F
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6 |
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1.91 |
2.10 |
55.1 |
-2.02 |
-0.45 |
16.8 |
77 |
6 |
5 |
4 |
1 |
3 |
0 |
0 |
NAG 1 E NAG 2 E BMA 3 E MAN 5 E MAN 7 E NAG 1 F N
AG 2 F BMA 3 F MAN 5 F MAN 7 F
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7 |
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2.96 |
3.20 |
56.5 |
-2.21 |
-0.16 |
17.7 |
79 |
4 |
7 |
5 |
1 |
4 |
0 |
0 |
NAG 1 E NAG 2 E BMA 3 E MAN 5 E MAN 7 E NAG 1 F N
AG 2 F BMA 3 F MAN 5 F MAN 7 F
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8 |
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1.32 |
3.01 |
59.5 |
-2.03 |
-0.37 |
21.1 |
83 |
4 |
7 |
4 |
1 |
3 |
0 |
0 |
NAG 1 E NAG 2 E BMA 3 E MAN 4 E MAN 5 E MAN 6 E M
AN 7 E BMA 3 F MAN 7 F
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9 |
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1.95 |
2.13 |
69.2 |
-1.99 |
-0.68 |
19.1 |
80 |
6 |
6 |
4 |
3 |
2 |
0 |
0 |
NAG 1 E NAG 2 E BMA 3 E MAN 5 E MAN 7 E NAG 1 F N
AG 2 F BMA 3 F MAN 4 F MAN 5 F MAN 6 F MAN 7 F
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10 |
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1.36 |
3.00 |
69.4 |
-1.75 |
-0.57 |
19.9 |
84 |
4 |
8 |
4 |
3 |
2 |
0 |
0 |
NAG 1 E NAG 2 E BMA 3 E MAN 4 E MAN 5 E MAN 6 E M
AN 7 E NAG 2 F BMA 3 F MAN 4 F MAN 5 F MAN 6 F M
AN 7 F
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11 |
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2.30 |
2.46 |
72.6 |
-1.68 |
-0.55 |
15.7 |
84 |
5 |
4 |
5 |
3 |
2 |
0 |
0 |
NAG 2 F BMA 3 F MAN 4 F MAN 5 F MAN 6 F MAN 7 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program