 |
PDBsum entry 5mw3
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5mw3 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5mw3
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 pores,
coloured by radius |
|
5 pores,
coloured by radius
|
5 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.75 |
3.49 |
29.1 |
-0.50 |
0.24 |
14.4 |
74 |
|
3 |
2 |
0 |
3 |
5 |
1 |
0 |
|
5JJ 401 A
|
 |
|
2 |
 |
1.87 |
1.88 |
43.1 |
-2.00 |
-0.61 |
29.3 |
83 |
6 |
7 |
1 |
2 |
1 |
0 |
0 |
|
|
3 |
 |
2.95 |
3.05 |
50.5 |
-0.85 |
-0.15 |
17.0 |
80 |
3 |
3 |
3 |
5 |
1 |
1 |
0 |
|
|
4 |
 |
1.12 |
1.11 |
57.6 |
-1.80 |
-0.32 |
22.5 |
75 |
5 |
4 |
3 |
1 |
6 |
1 |
0 |
5JJ 401 A
|
 |
5 |
 |
1.75 |
2.56 |
66.1 |
-2.25 |
-0.42 |
33.2 |
80 |
9 |
10 |
2 |
3 |
2 |
2 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program