PDBsum entry 5mco Go to PDB code:  Tunnel analysis for: 5mco calculated with MOLE 2.0 PDB id 5mco Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.34 22.9 0.16 -0.31 3.2 84 1 0 2 5 1 0 0  BSD 501 A 2 1.33 1.34 32.3 0.42 -0.06 4.0 84 1 0 4 7 1 0 0  BSD 501 A 3 1.14 1.14 32.6 -0.53 -0.06 11.4 77 1 2 2 6 3 1 0  BSD 501 A 4 1.34 1.34 35.6 -0.01 0.00 5.3 77 1 1 3 7 5 1 0  BSD 501 A 5 1.67 2.84 20.4 -0.33 -0.27 9.2 88 1 2 2 2 1 0 1   6 1.14 1.13 20.1 1.88 0.55 1.3 78 0 0 2 7 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.