PDBsum entry 5m3m Go to PDB code:  Pore analysis for: 5m3m calculated with MOLE 2.0 PDB id 5m3m Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.64 25.9 -0.07 -0.12 15.6 77 3 2 1 3 1 0 0   2 2.23 2.24 42.3 -1.96 -0.40 15.6 85 3 5 5 2 2 2 0   3 1.29 1.29 61.5 -0.71 -0.14 19.2 83 8 5 3 10 1 1 0   4 1.52 1.51 69.0 -2.03 -0.50 26.1 83 8 2 8 4 0 1 0   5 1.26 2.18 77.3 -1.57 -0.41 23.3 90 6 4 6 7 0 0 0   6 1.50 1.53 84.0 -1.98 -0.38 25.8 83 9 5 7 3 2 2 0   7 1.39 4.90 87.8 -2.18 -0.52 23.0 88 10 1 9 1 0 1 0   8 1.32 1.47 92.7 -1.06 -0.34 15.6 85 10 3 10 7 0 2 0   9 1.47 1.52 100.1 -1.93 -0.45 21.2 79 12 7 5 2 4 1 0   10 1.19 1.19 100.8 -2.06 -0.49 24.7 81 12 7 5 6 4 0 1   11 1.68 2.82 111.3 -1.90 -0.43 20.5 78 10 8 9 3 5 4 0   12 1.49 4.94 116.9 -1.72 -0.37 20.4 83 13 4 11 3 2 3 0   13 1.22 1.35 119.2 -1.27 -0.36 14.0 83 10 8 15 12 4 4 0   14 1.23 1.50 132.8 -0.22 -0.15 11.0 82 10 2 12 23 3 6 0   15 2.53 2.88 136.1 -1.87 -0.51 14.2 86 11 7 15 6 6 4 0   16 1.48 1.46 147.5 -2.02 -0.52 16.9 88 10 6 16 6 5 3 0   17 1.31 1.44 153.7 -1.10 -0.35 13.7 85 11 7 17 13 4 2 0   18 1.28 3.72 151.2 -1.04 -0.33 18.4 83 10 11 12 13 5 1 0   19 1.28 2.47 164.1 -1.40 -0.39 17.1 87 12 8 17 14 4 1 0   20 1.55 4.10 173.3 -1.52 -0.44 14.7 83 15 7 19 12 5 5 0   21 1.63 5.03 171.8 -1.87 -0.51 14.7 88 13 5 18 6 5 4 0   22 1.27 1.55 202.9 -1.73 -0.42 19.2 84 17 11 19 14 4 7 0   23 1.19 1.41 208.9 -1.54 -0.35 16.8 82 19 13 17 13 6 9 0   24 1.34 2.42 210.2 -1.13 -0.20 20.6 83 22 12 11 19 5 4 0   25 1.35 1.36 223.6 -1.35 -0.33 19.0 84 16 14 14 14 7 4 0   26 1.73 3.30 233.6 -1.83 -0.46 17.2 84 21 9 19 11 5 8 0   27 1.68 1.78 253.3 -1.97 -0.51 24.4 81 25 17 10 12 4 4 0   28 1.19 1.31 269.6 -1.07 -0.21 13.4 81 19 10 21 21 6 8 0   29 1.67 1.76 292.3 -1.96 -0.46 20.5 82 26 18 23 11 9 9 1   30 1.43 2.13 297.6 -1.40 -0.31 19.0 84 25 18 25 22 11 4 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.