spacer
spacer

PDBsum entry 5lw7

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 5lw7 calculated with MOLE 2.0 PDB id
5lw7
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.95 3.34 35.7 -1.64 -0.04 23.5 76 4 1 2 1 2 1 0  
2 1.94 3.35 65.4 -1.55 -0.32 20.2 75 4 4 2 2 4 1 0  
3 2.04 2.24 99.5 -1.86 -0.44 21.2 78 8 6 3 3 4 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer