PDBsum entry 5lsy Go to PDB code:  Tunnel analysis for: 5lsy calculated with MOLE 2.0 PDB id 5lsy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 2.48 15.7 -0.04 0.19 3.0 73 2 0 3 4 4 0 0  76M 1805 A 2 1.79 1.89 18.1 -1.28 -0.20 9.6 72 5 0 4 3 5 0 0  76M 1805 A 3 1.20 2.43 18.2 -0.35 0.09 5.2 76 3 0 4 4 4 0 0  76M 1805 A 4 1.78 1.78 18.4 -1.21 0.25 11.4 57 2 0 2 1 8 0 1  76M 1805 A 5 1.57 1.58 20.8 -1.02 0.17 27.8 72 3 4 1 3 3 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.