PDBsum entry 5lmo Go to PDB code:  Tunnel analysis for: 5lmo calculated with MOLE 2.0 PDB id 5lmo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.27 59.0 -1.36 -0.73 14.9 85 4 1 0 0 0 0 0  G 945 A A 946 A G 947 A C 948 A U 1235 A A 1236 A U 1301 A C 1303 A G 1304 A G 1305 A A 1306 A U 1307 A U 1308 A U 1330 A G 1331 A A 1332 A A 1333 A G 1334 A U 1364 A 2 1.22 1.22 64.2 -1.87 -0.58 21.3 78 6 2 0 0 1 0 0  G 945 A A 946 A G 947 A C 948 A U 1235 A A 1236 A C 1243 A C 1244 A A 1245 A C 1246 A G 1304 A G 1305 A A 1306 A U 1307 A U 1308 A U 1330 A G 1331 A A 1333 A G 1334 A U 1364 A 3 1.22 1.22 71.1 -0.58 -0.78 5.6 83 2 0 0 0 0 0 0  G 945 A A 946 A G 947 A C 948 A U 1235 A A 1236 A U 1257 A G 1258 A C 1259 A C 1260 A C 1270 A G 1271 A G 1272 A G 1304 A G 1305 A A 1306 A U 1307 A C 1314 A U 1315 A G 1316 A A 1324 A C 1325 A A 1333 A G 1334 A G 1355 A G 1356 A C 1362 A C 1363 A A 1363 A i:A U 1364 A 4 1.21 1.21 74.2 -0.71 -0.78 6.3 83 3 0 1 0 0 0 0  G 945 A A 946 A G 947 A C 948 A A 949 A U 950 A G 951 A U 952 A G 953 A G 954 A U 955 A U 956 A U 960 A U 961 A C 962 A A 974 A A 977 A C 1223 A G 1224 A U 1235 A A 1236 A G 1304 A G 1305 A A 1306 A U 1307 A A 1324 A A 1333 A G 1334 A C 1363 A A 1363 A i:A U 1364 A 5 1.23 1.23 76.6 -1.13 -0.56 9.2 78 2 1 3 0 1 0 0  C 940 A G 941 A G 942 A U 943 A G 945 A A 946 A G 947 A C 1234 A U 1235 A A 1236 A C 1237 A G 1304 A G 1305 A A 1306 A A 1333 A G 1334 A C 1336 A G 1337 A U 1351 A C 1352 A G 1353 A C 1354 A U 1364 A G 1365 A 6 1.17 1.17 94.7 -0.94 -0.71 8.8 78 5 1 2 0 1 1 0  G 945 A A 946 A G 947 A C 948 A A 949 A U 950 A G 951 A G 966 A C 967 A A 969 A C 970 A G 971 A C 972 A G 973 A A 975 A A 977 A G 1224 A C 1230 A G 1231 A U 1235 A A 1236 A G 1304 A G 1305 A A 1306 A U 1307 A A 1324 A A 1333 A G 1334 A C 1363 A A 1363 A i:A U 1364 A G 1365 A C 1366 A C 1367 A 7 1.20 1.20 135.7 -1.16 -0.73 12.7 80 8 2 1 1 0 1 0  G 933 A C 934 A A 935 A G 945 A A 946 A G 947 A C 948 A A 949 A U 950 A G 951 A A 968 A C 970 A G 971 A C 972 A G 973 A A 975 A A 977 A U 1065 A U 1090 A U 1091 A C 1172 A G 1173 A G 1182 A A 1183 A G 1186 A G 1187 A G 1224 A U 1235 A A 1236 A G 1304 A G 1305 A A 1306 A U 1307 A A 1324 A A 1333 A G 1334 A C 1344 A U 1345 A A 1346 A C 1363 A A 1363 A i:A U 1364 A G 1365 A C 1366 A C 1367 A 8 1.32 1.75 18.1 2.68 0.76 4.4 91 1 1 0 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.