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PDBsum entry 5lhs

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5lhs calculated with MOLE 2.0 PDB id
5lhs
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.50 2.26 25.8 -2.23 -0.10 21.5 77 6 3 1 0 3 1 0  
2 1.92 2.82 28.0 -2.11 -0.18 23.2 76 6 3 2 1 3 1 0  
3 1.47 2.49 30.8 -2.45 -0.38 25.5 82 5 2 3 1 0 2 0  
4 1.19 1.23 30.8 0.23 -0.05 11.8 83 3 1 3 7 2 1 1  
5 1.82 2.00 32.8 -2.28 -0.10 30.7 79 5 3 2 1 2 1 0  
6 1.57 4.21 33.3 -2.29 0.01 29.9 77 6 4 2 0 5 0 0  
7 1.48 2.09 36.0 -2.50 -0.25 31.7 82 6 3 3 0 2 1 0  
8 1.20 1.38 177.2 -1.68 -0.31 19.8 80 10 8 9 6 5 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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