PDBsum entry 5l6c Go to PDB code:  Pore analysis for: 5l6c calculated with MOLE 2.0 PDB id 5l6c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 3.56 36.7 -2.84 -0.38 31.4 76 6 3 1 0 2 1 0   2 1.66 2.01 83.9 -1.36 -0.31 21.7 84 9 6 5 8 1 2 0   3 1.46 1.65 90.3 -0.83 -0.32 11.4 88 5 6 10 10 3 0 0  6NV 301 K 4 1.60 2.17 104.8 -2.06 -0.41 23.6 79 13 6 6 3 6 0 1   5 1.66 3.00 111.9 -2.82 -0.54 31.0 78 16 9 6 1 5 1 0   6 1.60 2.13 113.3 -2.22 -0.32 26.9 79 19 7 7 5 8 2 0   7 1.20 1.28 133.3 -2.17 -0.44 23.8 81 16 13 11 6 8 0 0   8 1.22 1.23 136.7 -2.15 -0.41 25.4 83 17 10 13 7 6 1 0   9 1.68 1.85 134.8 -1.43 -0.42 13.9 86 11 3 15 8 6 0 1  6NV 301 K 10 1.66 1.85 134.8 -1.86 -0.25 22.4 80 9 8 7 5 6 2 0   11 1.20 1.28 140.5 -1.58 -0.30 19.7 83 16 10 11 11 7 0 0   12 1.88 2.86 144.6 -1.80 -0.43 20.5 85 12 8 8 7 4 0 0   13 1.70 3.07 145.7 -1.89 -0.40 22.6 84 17 10 10 8 6 1 0   14 1.67 1.85 148.6 -1.61 -0.44 14.1 86 13 3 15 9 6 1 0  6NV 301 K 15 1.65 1.79 156.2 -1.44 -0.36 15.9 83 13 6 14 9 9 1 0  6NV 301 K 16 1.69 1.87 154.9 -2.06 -0.56 20.6 85 14 7 14 7 4 1 0  6NV 301 K 17 1.63 1.80 157.7 -1.92 -0.60 17.2 86 13 5 12 5 5 0 0  6NV 301 K 18 1.28 1.19 166.0 -1.35 -0.42 13.3 84 14 3 14 11 5 1 0  6NV 301 K 19 1.20 1.20 172.0 -1.68 -0.40 20.9 86 14 13 14 14 5 0 0   20 1.20 1.20 174.2 -1.66 -0.37 20.1 86 14 13 15 14 5 0 0   21 1.19 1.19 175.9 -1.65 -0.47 16.4 87 14 8 20 12 5 0 0  6NV 301 K 22 1.73 1.90 187.6 -2.01 -0.44 21.5 84 21 5 13 7 8 1 0  6NV 301 K 23 1.74 2.30 190.7 -2.25 -0.44 23.6 83 25 7 14 6 8 1 1   24 1.68 2.22 194.3 -2.29 -0.47 21.8 83 21 6 11 6 6 1 0   25 1.18 1.21 207.8 -1.97 -0.47 19.6 84 18 11 20 12 10 1 0  6NV 301 K 26 1.97 2.10 203.4 -2.69 -0.62 25.6 83 21 8 8 2 5 0 0   27 1.91 2.14 206.2 -2.64 -0.58 27.0 83 26 10 10 3 7 1 0   28 1.77 3.42 210.8 -2.68 -0.56 28.1 83 27 11 13 5 6 2 0   29 1.59 3.12 212.1 -2.17 -0.39 24.3 81 27 10 13 7 11 2 0   30 1.94 1.89 243.4 -2.59 -0.45 28.4 81 35 9 12 4 10 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.