PDBsum entry 5l6b Go to PDB code:  Pore analysis for: 5l6b calculated with MOLE 2.0 PDB id 5l6b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 1.52 64.0 -1.12 -0.33 17.6 78 6 3 5 5 4 1 0   2 1.58 1.75 89.6 -1.99 -0.52 25.6 85 9 11 8 4 1 3 1   3 1.25 1.35 105.0 -2.38 -0.53 29.5 79 11 11 4 4 4 1 0   4 1.24 1.37 108.8 -1.86 -0.39 20.7 75 13 11 5 6 8 1 0   5 1.69 1.87 109.9 -1.71 -0.23 20.4 77 15 6 9 10 6 2 0   6 1.59 1.61 111.9 -1.11 -0.30 18.8 76 6 9 4 5 2 4 1   7 1.22 1.31 114.2 -1.28 -0.26 17.2 77 13 7 8 9 7 1 1   8 1.62 2.04 123.5 -1.69 -0.22 20.7 75 16 6 6 9 8 3 0   9 1.79 2.06 124.5 -2.22 -0.45 27.1 73 16 12 4 6 7 2 0   10 1.79 1.97 127.1 -1.93 -0.36 22.2 77 14 8 7 6 6 2 0   11 1.56 1.76 131.6 -1.46 -0.26 20.9 75 17 9 4 12 6 2 0   12 1.59 1.56 130.0 -2.09 -0.44 28.1 79 16 14 6 5 6 0 1   13 1.60 1.56 137.1 -1.36 -0.26 21.7 81 18 11 6 11 5 0 1   14 1.59 1.59 138.2 -1.83 -0.30 23.9 80 19 10 8 9 8 1 1   15 1.59 1.55 141.8 -2.04 -0.39 25.2 83 17 11 9 6 6 0 1   16 1.41 1.70 147.1 -1.65 -0.27 22.0 75 16 11 7 12 7 3 0   17 1.53 1.68 161.8 -1.78 -0.31 24.6 80 19 15 9 12 7 1 1   18 1.42 1.62 193.6 -1.79 -0.40 17.2 79 17 7 15 10 11 3 0  04C 301 K MES 303 K 19 1.74 2.44 201.3 -1.90 -0.36 19.8 80 22 6 13 10 8 2 1   20 1.54 1.87 208.2 -1.85 -0.43 19.0 83 20 11 17 10 11 1 1  04C 301 K MES 303 K 21 1.57 1.94 216.0 -2.00 -0.40 22.1 83 25 10 15 10 8 0 2   22 1.85 1.92 215.7 -2.25 -0.48 23.2 78 22 11 9 7 7 2 0   23 1.13 1.46 222.0 -1.78 -0.37 18.5 78 23 6 11 14 7 3 0   24 1.75 4.40 229.5 -2.06 -0.38 21.9 82 29 6 15 11 7 3 0   25 1.60 1.97 230.3 -2.32 -0.51 25.4 83 25 15 11 7 7 0 1   26 1.51 1.67 233.2 -1.94 -0.38 22.0 81 25 9 12 12 8 2 1   27 1.27 1.15 236.7 -1.89 -0.40 20.9 82 26 10 13 13 7 1 1   28 1.62 1.83 244.2 -2.13 -0.40 24.1 85 32 10 17 11 7 1 1   29 1.51 1.67 247.9 -2.06 -0.41 24.5 84 28 13 14 12 8 0 2   30 1.78 1.95 264.6 -1.71 -0.31 18.8 77 25 7 16 14 12 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.