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PDBsum entry 5l66

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Pore analysis for: 5l66 calculated with MOLE 2.0 PDB id
5l66
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.45 3.28 45.6 -2.98 -0.73 31.5 84 5 6 5 0 0 3 0  
2 1.33 1.37 80.8 -1.65 -0.38 22.0 73 6 11 3 5 4 4 0  
3 1.56 1.75 90.8 -1.67 -0.34 22.8 82 13 8 4 7 3 0 0  
4 1.56 1.75 93.6 -1.54 -0.29 24.1 81 15 9 5 7 5 1 0  
5 1.23 1.34 107.1 -1.09 -0.18 17.6 77 12 5 5 11 6 1 0  
6 1.83 2.80 128.2 -2.51 -0.54 29.9 79 19 7 7 3 4 2 0  
7 1.73 1.89 131.2 -1.62 -0.28 18.9 78 14 9 10 7 6 3 0  
8 1.89 3.80 131.3 -1.94 -0.41 22.5 76 16 11 7 7 7 3 0  
9 1.25 1.37 132.4 -0.99 -0.14 15.6 74 14 6 8 11 6 4 0  
10 1.75 3.25 140.0 -2.51 -0.48 30.3 79 19 12 6 2 8 2 0  
11 1.66 1.85 143.6 -1.88 -0.23 22.7 80 9 8 7 5 6 2 0  
12 1.32 1.18 147.0 -1.19 -0.21 15.9 75 16 8 8 12 7 4 0  
13 1.80 2.93 151.0 -1.82 -0.36 22.0 76 17 9 8 9 5 4 0  
14 1.25 1.58 155.0 -2.00 -0.38 27.7 79 20 11 6 9 5 3 0  
15 1.29 2.07 156.2 -1.91 -0.52 17.5 89 15 6 19 6 4 0 1  BO2 301 Y
16 1.24 1.45 157.3 -1.37 -0.39 15.1 85 15 3 17 10 4 1 1  BO2 301 Y
17 1.67 1.90 204.5 -2.55 -0.57 23.5 85 23 9 16 3 7 0 0  
18 1.23 1.36 205.7 -2.04 -0.45 21.1 82 23 6 14 7 7 1 0  
19 1.30 1.38 214.4 -1.98 -0.46 19.7 84 22 7 16 9 5 1 0  
20 1.70 1.98 219.1 -1.92 -0.40 18.5 82 20 9 17 8 7 3 0  
21 1.23 1.29 215.5 -1.49 -0.34 17.2 81 22 4 14 13 5 2 0  
22 1.56 1.75 217.2 -2.03 -0.41 23.8 83 26 8 11 8 7 1 0  
23 1.80 2.94 223.2 -1.88 -0.32 21.4 79 24 9 14 7 10 4 0  
24 1.62 1.84 222.0 -2.11 -0.46 22.5 83 25 9 12 8 7 0 0  
25 1.21 1.21 237.3 -1.54 -0.30 16.7 79 22 8 15 13 8 4 0  
26 1.56 1.76 236.4 -1.62 -0.33 18.5 81 22 9 13 13 7 3 0  
27 1.81 3.76 242.4 -1.42 -0.23 15.8 77 20 10 16 12 10 6 0  
28 1.22 1.54 241.8 -2.15 -0.47 23.6 84 24 12 14 12 4 2 0  
29 1.73 3.37 257.6 -2.34 -0.47 24.2 84 29 9 16 5 9 1 0  
30 1.25 1.17 258.7 -1.93 -0.38 22.0 81 29 6 14 9 9 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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