PDBsum entry 5l5l

Pore analysis for: 5l5l calculated with

MOLE 2.0

PDB id

5l5l

Pores calculated on whole structure

Pores calculated excluding ligands

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6 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.37

1.86

25.3

-0.98

0.08

16.9

74

2

2

1

4

4

0

0

2

1.42

1.42

64.4

-1.61

-0.36

19.4

78

5

4

3

5

2

3

0

3

1.37

1.86

25.3

-0.98

0.08

16.9

74

2

2

1

4

4

0

0

4

1.65

1.75

50.8

-0.69

-0.31

13.9

83

4

4

2

6

0

3

0

5

1.30

1.44

29.0

-0.13

-0.10

9.0

62

2

2

0

4

2

2

2

6

1.29

2.12

31.6

-0.40

-0.21

10.4

71

2

2

1

3

2

2

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.