PDBsum entry 5l5g

Pore analysis for: 5l5g calculated with

MOLE 2.0

PDB id

5l5g

Pores calculated on whole structure

Pores calculated excluding ligands

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15 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.48

1.46

258.3

-1.83

-0.38

22.7

81

16

12

11

11

6

4

1

2

1.86

1.85

308.6

-1.97

-0.42

25.4

82

17

13

15

10

4

5

0

3

1.96

2.50

79.6

-1.15

-0.20

20.2

81

4

2

4

6

1

0

0

4

1.30

1.28

189.3

-0.91

-0.29

11.6

79

7

6

11

12

6

5

0

5

1.80

1.88

38.4

-1.62

-0.04

17.7

75

6

2

0

3

4

0

0

6

1.80

1.88

38.4

-1.62

-0.04

17.7

75

6

2

0

3

4

0

0

7

1.81

1.80

38.2

-1.51

-0.01

16.6

74

5

2

0

3

4

0

0

8

1.57

2.43

29.5

-1.14

-0.20

20.9

74

3

2

0

2

1

1

1

9

1.22

1.22

26.5

-0.86

0.15

3.2

67

1

0

3

2

3

2

0

10

1.19

1.20

29.5

-0.94

0.13

2.8

66

1

0

4

1

5

3

0

11

1.44

1.60

27.3

-1.08

0.13

4.7

63

1

0

4

0

4

2

1

12

1.32

1.49

28.2

-0.96

0.18

2.9

61

1

0

3

0

5

3

1

13

1.79

1.85

34.8

-1.95

-0.52

11.2

83

1

2

5

1

1

1

0

14

1.24

1.43

27.3

0.12

0.03

7.0

71

1

2

1

4

2

1

1

15

1.57

2.34

44.2

-1.62

-0.46

11.2

82

2

1

5

1

1

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.