PDBsum entry 5l54 Go to PDB code:  Pore analysis for: 5l54 calculated with MOLE 2.0 PDB id 5l54 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.70 4.18 38.1 -1.06 -0.17 18.2 73 4 7 2 4 2 3 0   2 1.80 1.95 102.2 -1.40 -0.25 18.7 72 9 7 6 7 8 3 0   3 1.54 1.72 104.8 -1.47 -0.23 19.4 79 13 6 5 7 8 1 0   4 1.81 1.86 107.9 -1.67 -0.36 20.3 77 11 9 8 4 7 1 0   5 1.95 1.99 109.4 -1.83 -0.29 21.3 73 12 4 5 6 8 2 0   6 1.87 1.93 115.1 -2.13 -0.39 22.8 78 14 6 7 3 7 0 0   7 1.86 2.92 119.8 -2.15 -0.35 24.4 79 15 6 9 5 9 1 0   8 1.80 1.99 119.8 -2.17 -0.44 23.8 76 14 7 6 5 5 2 0   9 1.98 2.00 124.4 -2.19 -0.40 24.1 77 15 7 7 3 8 1 0   10 1.77 1.99 125.5 -2.48 -0.54 25.7 81 17 9 8 2 4 0 0   11 1.76 1.90 126.7 -2.08 -0.36 25.0 79 19 6 9 11 6 3 0   12 1.53 1.53 132.6 -2.30 -0.44 27.3 75 16 9 5 5 4 3 0   13 1.60 1.79 141.3 -1.39 -0.27 19.7 73 15 8 3 8 9 3 1   14 1.61 2.78 140.1 -1.72 -0.32 21.1 78 17 9 6 6 9 2 1   15 1.21 1.19 155.8 -2.13 -0.49 26.3 79 19 9 7 9 4 7 0   16 1.30 1.35 172.2 -2.31 -0.48 25.4 80 22 10 11 7 9 6 0   17 2.14 3.36 199.5 -2.30 -0.40 22.1 81 17 5 14 6 11 1 0   18 1.84 1.94 204.2 -2.10 -0.42 21.3 81 18 6 11 6 7 2 0   19 1.89 1.93 202.3 -2.30 -0.47 21.7 83 18 6 13 4 7 0 0   20 1.99 2.00 208.3 -2.09 -0.42 21.7 80 18 6 10 5 5 2 0   21 1.58 1.60 213.1 -1.76 -0.34 19.8 81 18 5 9 10 6 2 0   22 1.77 2.05 210.0 -2.50 -0.50 23.5 83 19 8 15 5 8 1 0   23 2.13 2.14 212.1 -1.96 -0.35 20.6 78 18 6 12 8 9 4 0   24 1.83 1.99 217.2 -2.07 -0.37 21.1 80 19 10 15 6 12 2 0   25 1.55 1.58 218.8 -2.58 -0.51 25.9 82 21 10 14 5 7 2 0   26 1.59 2.59 224.7 -1.86 -0.37 20.3 79 22 8 10 9 8 3 1   27 1.89 3.47 225.8 -2.36 -0.41 24.0 83 26 6 18 9 9 2 0   28 1.72 2.80 235.1 -2.00 -0.41 21.1 80 22 9 13 8 11 2 1   29 1.22 1.30 263.7 -2.24 -0.47 23.8 81 27 9 15 9 7 7 0   30 1.28 1.49 292.3 -1.58 -0.33 16.8 81 23 8 19 9 12 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.