PDBsum entry 5l4k Go to PDB code:  Tunnel analysis for: 5l4k calculated with MOLE 2.0 PDB id 5l4k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.49 1.51 18.0 0.10 0.06 12.2 86 1 2 1 4 1 0 0   2 1.30 2.55 19.3 -1.51 -0.68 19.2 72 0 2 1 2 0 0 0   3 1.23 1.40 17.5 0.28 0.28 15.0 72 2 1 1 2 3 0 0   4 1.29 1.42 16.5 0.73 0.38 9.7 72 1 2 1 4 1 0 0   5 1.20 1.21 15.2 1.25 0.43 1.6 59 0 0 0 3 3 0 0   6 1.20 1.62 24.2 0.79 0.18 5.0 74 0 2 2 7 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.