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PDBsum entry 5l3e
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Tunnel analysis for: 5l3e calculated with  MOLE 2.0
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PDB id
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5l3e
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.41 |
1.41 |
27.5 |
-0.80 |
-0.26 |
11.6 |
80 |
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3 |
1 |
2 |
4 |
1 |
1 |
0 |
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FAD 901 A
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2 |
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1.43 |
1.42 |
29.8 |
-0.17 |
-0.08 |
9.6 |
82 |
2 |
1 |
1 |
8 |
1 |
1 |
0 |
FAD 901 A
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3 |
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1.36 |
1.36 |
32.7 |
-0.18 |
0.02 |
9.8 |
85 |
2 |
2 |
3 |
8 |
3 |
0 |
0 |
FAD 901 A E11 902 A E11 903 A E11 904 A
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4 |
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1.31 |
1.53 |
38.2 |
-0.95 |
-0.24 |
13.5 |
85 |
3 |
3 |
4 |
5 |
3 |
0 |
0 |
FAD 901 A E11 902 A E11 903 A E11 904 A
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5 |
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1.33 |
1.33 |
41.2 |
-0.62 |
-0.23 |
15.0 |
86 |
2 |
5 |
2 |
9 |
2 |
0 |
0 |
FAD 901 A E11 902 A E11 903 A E11 904 A
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6 |
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1.37 |
1.52 |
46.6 |
-1.20 |
-0.38 |
18.2 |
85 |
3 |
6 |
3 |
6 |
2 |
0 |
0 |
FAD 901 A E11 902 A E11 903 A E11 904 A
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7 |
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1.24 |
3.22 |
27.5 |
1.04 |
0.44 |
8.9 |
79 |
2 |
0 |
3 |
10 |
3 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program