PDBsum entry 5l1h Go to PDB code:  Pore analysis for: 5l1h calculated with MOLE 2.0 PDB id 5l1h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.49 2.18 28.4 -1.42 -0.31 23.1 81 3 5 2 1 2 2 0   2 1.39 2.51 41.7 1.43 1.06 1.1 73 0 0 1 9 9 0 0   3 1.59 2.53 45.6 -2.23 -0.50 29.3 86 4 5 7 3 0 0 0   4 2.77 2.76 47.1 -1.04 -0.60 12.9 86 3 4 5 3 1 2 0  GYK 902 C 5 1.29 2.53 48.2 1.05 1.03 1.3 71 0 0 2 9 10 0 0   6 1.22 1.22 50.4 -1.01 -0.44 13.9 80 3 3 4 2 3 2 0   7 1.25 3.41 50.8 0.17 0.92 1.7 69 0 0 3 8 12 0 0   8 1.18 1.18 68.0 -0.61 -0.31 15.2 85 6 8 9 8 2 1 0  GYK 902 A 9 1.22 2.82 89.4 0.67 0.05 4.7 88 3 4 5 19 6 0 0   10 1.19 1.19 89.7 -0.91 -0.39 18.4 77 7 7 4 6 4 0 1  GYK 902 A GYK 902 B 11 1.20 2.77 94.3 0.43 0.04 4.2 89 3 4 7 18 6 0 0   12 1.29 1.30 98.9 -1.99 -0.62 21.7 90 3 9 8 4 1 0 0  NAG 901 D 13 1.33 2.66 116.4 0.67 0.00 4.1 87 2 3 4 21 7 1 0   14 1.16 1.16 121.1 0.48 0.00 5.6 85 3 4 6 23 9 1 0  GYK 902 A 15 1.43 2.16 121.3 0.38 -0.04 4.2 88 2 3 5 20 7 1 0   16 1.20 1.20 123.3 0.02 -0.11 9.8 80 4 7 8 11 8 1 0  GYK 902 A 17 1.17 1.17 137.3 -1.93 -0.62 20.6 90 4 10 10 4 1 0 0  NAG 901 A 18 1.15 1.38 157.3 -1.43 -0.42 20.2 87 10 15 14 14 2 0 0   19 1.17 1.27 161.5 -0.57 -0.21 17.0 87 8 14 9 18 3 0 0   20 1.32 2.02 166.6 -0.80 -0.21 13.7 82 12 6 8 14 5 1 2   21 1.24 1.64 189.2 -0.53 -0.25 14.9 87 8 14 8 21 4 1 0   22 1.21 1.31 190.0 -0.30 -0.05 13.7 81 5 11 7 17 9 0 0   23 1.19 1.38 269.2 -1.46 -0.47 21.3 85 11 23 12 16 4 2 0  NAG 901 D 24 1.17 1.17 348.3 -0.22 -0.14 11.6 85 11 19 16 38 11 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.