PDBsum entry 5l1b Go to PDB code:  Pore analysis for: 5l1b calculated with MOLE 2.0 PDB id 5l1b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.81 1.79 36.1 -2.42 -0.52 25.4 93 4 3 6 2 0 0 0   2 2.91 5.00 37.5 -2.06 -0.30 26.7 79 6 2 3 2 1 0 0   3 1.31 1.55 64.7 0.05 0.07 8.8 76 2 2 4 9 5 3 0   4 1.40 2.72 73.2 -1.53 -0.45 20.9 82 9 4 4 6 1 1 0   5 1.56 2.91 86.9 -0.36 -0.26 4.5 90 1 5 12 15 2 1 0   6 1.19 1.19 144.2 -1.80 -0.52 19.0 81 10 6 9 4 4 3 0   7 1.32 1.29 148.7 -0.63 -0.19 15.9 81 8 6 6 16 7 2 1   8 2.01 2.04 149.0 -1.64 -0.49 22.5 86 13 11 9 10 3 1 0   9 1.59 2.88 156.3 -0.73 -0.36 9.6 88 9 8 14 19 5 0 0   10 1.90 1.93 172.6 -1.81 -0.42 25.7 84 17 12 6 13 4 0 0   11 1.70 3.14 199.8 -0.89 -0.34 11.7 87 13 12 15 23 5 0 0   12 1.49 2.61 248.3 -1.90 -0.60 24.7 84 19 25 10 12 1 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.