PDBsum entry 5kuf Go to PDB code:  Pore analysis for: 5kuf calculated with MOLE 2.0 PDB id 5kuf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   44 pores, coloured by radius 39 pores, coloured by radius 39 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.61 41.7 -0.63 -0.46 7.7 90 2 3 11 4 1 0 3   2 1.28 2.00 47.5 -1.57 -0.42 21.2 89 5 5 6 4 1 1 0   3 1.11 1.11 48.3 0.13 0.06 12.3 79 5 2 3 9 2 0 0   4 1.38 1.38 51.0 -1.44 -0.46 17.5 92 5 5 10 4 1 1 0   5 1.27 2.32 56.8 -1.52 -0.45 19.6 87 5 6 6 4 1 2 0   6 1.46 1.73 63.1 -0.73 -0.35 12.8 87 6 4 11 6 2 1 3   7 1.30 1.58 94.3 -0.51 -0.23 13.1 86 8 6 11 10 4 1 3   8 1.58 1.61 103.1 -1.76 -0.59 16.7 93 8 7 14 5 2 0 0   9 1.22 1.46 120.9 -0.65 -0.04 16.6 86 10 6 7 14 3 2 0   10 1.21 1.48 126.5 -0.23 -0.05 11.8 87 11 4 12 16 3 1 3   11 1.18 4.07 149.7 -0.54 -0.11 17.6 83 10 8 7 13 5 1 0   12 1.68 2.56 180.4 -1.75 -0.43 22.2 86 19 9 12 9 4 1 0   13 1.34 1.35 182.8 -1.39 -0.38 19.4 83 17 8 9 10 6 1 0   14 1.32 1.77 361.8 -1.39 -0.19 21.5 78 33 12 13 17 15 0 0   15 1.23 1.24 25.3 2.33 0.57 1.2 78 0 0 1 10 3 0 0   16 1.40 1.64 25.5 1.63 0.64 4.0 85 1 0 5 7 2 0 0   17 1.14 1.47 30.4 1.95 0.75 2.1 78 1 0 4 10 3 0 0   18 1.45 2.71 30.9 1.59 0.73 3.7 81 1 0 5 6 4 0 0   19 1.30 1.30 32.3 2.76 0.73 0.7 89 0 0 2 11 1 0 0   20 1.30 1.30 34.0 2.22 0.76 1.4 85 1 0 3 8 2 0 0   21 1.45 2.71 40.2 2.34 0.96 1.6 81 1 0 4 10 4 0 0   22 1.47 2.51 41.9 1.15 1.11 2.0 66 1 0 1 9 6 0 0   23 1.38 1.61 42.5 0.63 0.26 8.4 81 1 2 5 7 3 1 0   24 1.47 2.99 46.3 1.76 0.70 1.1 78 0 0 5 10 5 1 0   25 2.19 5.27 46.3 0.20 1.33 1.8 53 0 0 0 6 7 0 0   26 1.49 2.50 46.4 2.38 0.77 0.7 81 0 0 2 12 2 0 0   27 1.44 2.70 47.0 1.95 1.17 1.5 73 1 0 4 12 6 0 0   28 2.64 4.36 49.7 -2.35 -0.53 30.7 84 10 2 3 4 0 0 0   29 2.55 3.46 50.2 -1.95 -0.44 27.9 83 7 3 3 4 1 1 0   30 2.57 3.54 55.1 -1.87 -0.41 25.6 83 8 3 4 4 1 1 0   31 2.58 3.46 62.6 -1.45 -0.32 22.8 80 10 4 2 6 1 1 0   32 2.55 3.50 74.4 -2.20 -0.49 28.8 82 12 4 5 4 1 1 0   33 1.44 2.98 75.8 0.28 0.32 7.4 80 2 1 6 8 4 2 0   34 2.21 4.73 77.5 0.81 1.12 2.9 64 1 0 1 11 8 0 0   35 1.07 1.42 80.8 0.98 0.84 3.6 74 2 0 2 12 7 0 0   36 1.35 2.29 83.5 0.74 1.06 4.2 70 2 0 2 13 7 0 0   37 1.41 2.43 151.1 0.09 0.04 7.9 85 3 2 9 10 2 3 0   38 1.14 1.42 163.4 0.32 0.06 5.7 86 2 1 9 12 2 3 0   39 1.13 1.13 25.2 0.30 -0.19 7.3 91 2 0 1 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.