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PDBsum entry 5kfh
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Pore analysis for: 5kfh calculated with  MOLE 2.0
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PDB id
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5kfh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.53 |
1.69 |
34.3 |
-1.95 |
-0.66 |
23.6 |
73 |
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5 |
2 |
0 |
1 |
0 |
0 |
0 |
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DA 7 P DT 8 P DG 7 T DA 8 T DC 9 T DG 10 T
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2 |
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1.60 |
1.69 |
38.6 |
-1.15 |
-0.14 |
13.8 |
65 |
3 |
0 |
0 |
2 |
2 |
0 |
0 |
DT 8 P DA 2 T DT 3 T DT 4 T
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3 |
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1.32 |
1.48 |
45.1 |
-1.45 |
-0.50 |
20.1 |
86 |
5 |
4 |
2 |
2 |
0 |
1 |
0 |
DA 7 P DT 8 P DT 6 T DG 7 T DA 8 T DC 9 T DG 10 T
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4 |
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1.32 |
1.47 |
47.3 |
-0.60 |
0.05 |
15.1 |
77 |
4 |
3 |
1 |
3 |
3 |
1 |
0 |
DTP 508 A DT 8 P DA 2 T DT 3 T DT 4 T DA 5 T DT 6
T DG 7 T
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5 |
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1.33 |
1.47 |
53.2 |
-1.02 |
-0.05 |
24.1 |
79 |
6 |
5 |
1 |
4 |
2 |
1 |
0 |
CA 502 A DTP 508 A DT 8 P MN 101 P DA 5 T DT 6 T
DG 7 T
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6 |
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1.73 |
1.73 |
55.2 |
-0.51 |
-0.20 |
10.1 |
77 |
4 |
1 |
2 |
2 |
3 |
0 |
0 |
DTP 508 A DA 7 P DT 8 P DA 2 T DT 3 T DT 4 T DA 5
T DT 6 T DG 7 T DA 8 T DC 9 T DG 10 T
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7 |
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1.34 |
1.47 |
73.7 |
-0.96 |
-0.39 |
16.1 |
81 |
7 |
1 |
2 |
2 |
1 |
0 |
0 |
DC 3 P DG 4 P DT 5 P DC 6 P DT 3 T DT 4 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program