PDBsum entry 5kf4 Go to PDB code:  Tunnel analysis for: 5kf4 calculated with MOLE 2.0 PDB id 5kf4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 24.0 -0.81 -0.43 12.2 82 2 1 1 3 0 2 0   2 1.27 1.27 25.4 -0.68 -0.43 11.4 89 3 1 4 5 0 0 0   3 1.27 1.27 38.2 -0.88 -0.39 16.5 86 4 2 3 6 1 0 0   4 1.28 1.28 42.8 -0.04 -0.40 5.7 87 3 0 5 8 0 2 0   5 1.28 1.28 48.0 -0.33 -0.44 9.6 87 4 3 5 8 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.