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PDBsum entry 5ke8
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Tunnel analysis for: 5ke8 calculated with  MOLE 2.0
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PDB id
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5ke8
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.04 |
2.04 |
15.5 |
-1.91 |
-0.52 |
23.4 |
84 |
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2 |
1 |
0 |
1 |
0 |
1 |
0 |
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DG 4 B 5CM 5 B DG 6 B
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2 |
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1.41 |
1.60 |
19.7 |
-2.31 |
-0.85 |
30.2 |
84 |
2 |
1 |
0 |
0 |
0 |
0 |
0 |
DG 4 B 5CM 5 B DG 6 B DT 7 B DG 8 B DA 4 C 5CM 5
C DG 6 C DC 7 C
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3 |
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1.54 |
1.54 |
20.1 |
-2.41 |
-0.81 |
30.1 |
89 |
2 |
1 |
0 |
0 |
0 |
0 |
0 |
DG 4 B 5CM 5 B DG 6 B DC 3 C DA 4 C 5CM 5 C DG 6 C
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4 |
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1.40 |
1.59 |
20.2 |
-1.22 |
-0.82 |
14.7 |
84 |
2 |
1 |
0 |
0 |
0 |
0 |
0 |
DG 4 B 5CM 5 B DG 6 B DT 7 B DG 8 B DG 9 B DA 4 C
5CM 5 C DG 6 C
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5 |
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1.81 |
1.98 |
30.1 |
-1.37 |
-0.43 |
19.3 |
89 |
3 |
1 |
1 |
1 |
1 |
0 |
0 |
DG 4 B 5CM 5 B DG 6 B DT 7 B DG 1 C DC 2 C DC 3 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program