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PDBsum entry 5kdt
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Pore analysis for: 5kdt calculated with  MOLE 2.0
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PDB id
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5kdt
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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1 pore,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.46 |
1.66 |
41.4 |
-1.10 |
-0.37 |
13.6 |
87 |
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4 |
3 |
4 |
3 |
2 |
1 |
0 |
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GLU 302 A 6RV 303 A
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2 |
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1.49 |
2.36 |
45.0 |
-2.18 |
-0.55 |
23.3 |
84 |
4 |
5 |
4 |
1 |
2 |
1 |
0 |
6RV 303 A
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3 |
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1.44 |
1.65 |
51.9 |
-0.52 |
-0.23 |
9.0 |
84 |
3 |
2 |
5 |
5 |
3 |
2 |
0 |
GLU 302 A 6RV 303 A
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4 |
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1.24 |
1.36 |
36.2 |
-1.43 |
-0.51 |
19.4 |
85 |
4 |
2 |
2 |
1 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program