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PDBsum entry 5kcv

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protein ligands links
Transferase/inhibitor PDB id
5kcv

 

 

 

 

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Contents
Protein chain
353 a.a.
Ligands
6S1
Waters ×79
PDB id:
5kcv
Name: Transferase/inhibitor
Title: Crystal structure of allosteric inhibitor, arq 092, in complex with autoinhibited form of akt1
Structure: Rac-alpha serine/threonine-protein kinase. Chain: a. Synonym: protein kinase b,pkb,protein kinase b alpha,pkb alpha,proto- oncogenE C-akt,rac-pk-alpha. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: akt1, pkb, rac. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf9
Resolution:
2.70Å     R-factor:   0.213     R-free:   0.269
Authors: S.Eathiraj
Key ref: J.M.Lapierre et al. (2016). Discovery of 3-(3-(4-(1-Aminocyclobutyl)phenyl)-5-phenyl-3H-imidazo[4,5-b]pyridin-2-yl)pyridin-2-amine (ARQ 092): An Orally Bioavailable, Selective, and Potent Allosteric AKT Inhibitor. J Med Chem, 59, 6455-6469. PubMed id: 27305487 DOI: 10.1021/acs.jmedchem.6b00619
Date:
07-Jun-16     Release date:   29-Jun-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P31749  (AKT1_HUMAN) -  RAC-alpha serine/threonine-protein kinase from Homo sapiens
Seq:
Struc:
480 a.a.
353 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/acs.jmedchem.6b00619 J Med Chem 59:6455-6469 (2016)
PubMed id: 27305487  
 
 
Discovery of 3-(3-(4-(1-Aminocyclobutyl)phenyl)-5-phenyl-3H-imidazo[4,5-b]pyridin-2-yl)pyridin-2-amine (ARQ 092): An Orally Bioavailable, Selective, and Potent Allosteric AKT Inhibitor.
J.M.Lapierre, S.Eathiraj, D.Vensel, Y.Liu, C.O.Bull, S.Cornell-Kennon, S.Iimura, E.W.Kelleher, D.E.Kizer, S.Koerner, S.Makhija, A.Matsuda, M.Moussa, N.Namdev, R.E.Savage, J.Szwaya, E.Volckova, N.Westlund, H.Wu, B.Schwartz.
 
  ABSTRACT  
 
The work in this paper describes the optimization of the 3-(3-phenyl-3H-imidazo[4,5-b]pyridin-2-yl)pyridin-2-amine chemical series as potent, selective allosteric inhibitors of AKT kinases, leading to the discovery of ARQ 092 (21a). The cocrystal structure of compound 21a bound to full-length AKT1 confirmed the allosteric mode of inhibition of this chemical class and the role of the cyclobutylamine moiety. Compound 21a demonstrated high enzymatic potency against AKT1, AKT2, and AKT3, as well as potent cellular inhibition of AKT activation and the phosphorylation of the downstream target PRAS40. Compound 21a also served as a potent inhibitor of the AKT1-E17K mutant protein and inhibited tumor growth in a human xenograft mouse model of endometrial adenocarcinoma.
 

 

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