PDBsum entry 5k8u Go to PDB code:  Pore analysis for: 5k8u calculated with MOLE 2.0 PDB id 5k8u Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.42 31.5 -1.63 -0.38 20.9 84 5 2 1 1 2 0 0   2 1.47 2.20 42.3 -1.18 -0.44 19.2 81 6 3 3 2 1 2 1  CL 705 A 3 1.70 1.70 44.6 -2.12 -0.50 28.8 82 7 5 2 3 1 2 1   4 1.47 2.32 47.2 -1.66 -0.44 25.5 86 9 3 3 6 0 2 0  CL 705 A 5 1.98 1.96 55.5 -2.33 -0.55 25.2 80 7 3 1 1 1 1 0   6 1.43 1.42 85.8 -2.55 -0.50 26.7 83 10 1 1 2 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.