PDBsum entry 5k3h Go to PDB code:  Pore analysis for: 5k3h calculated with MOLE 2.0 PDB id 5k3h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   29 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.48 25.4 0.66 0.44 13.2 67 3 2 0 3 2 1 0   2 2.41 2.74 40.6 0.27 0.14 6.1 85 3 0 2 9 1 2 0   3 1.52 1.72 62.3 -0.57 -0.03 16.6 79 4 7 2 10 1 2 0   4 1.13 1.39 67.6 -1.05 -0.30 15.2 81 4 4 4 8 3 0 0   5 1.40 1.41 103.8 -0.14 0.10 9.3 80 7 5 3 16 5 1 0   6 1.92 3.86 104.7 -2.11 -0.52 25.7 85 8 8 5 7 0 2 0   7 1.15 1.38 106.6 -1.41 -0.30 22.1 78 7 7 2 6 3 2 0   8 1.42 1.40 114.0 -0.82 -0.07 14.4 82 8 10 5 12 5 0 0   9 1.41 1.42 118.6 -0.40 -0.11 10.4 84 6 5 5 16 5 2 0   10 1.23 1.56 131.8 -1.25 -0.37 16.2 85 9 11 7 15 5 1 0   11 2.02 1.99 137.4 -1.26 -0.34 16.8 85 10 6 10 17 1 2 0   12 1.49 1.56 142.4 -0.34 -0.10 8.3 83 5 5 6 20 6 3 0   13 1.21 1.42 143.3 -0.87 -0.22 15.0 81 9 5 7 17 4 2 0   14 1.48 1.57 153.6 -1.08 -0.29 15.0 84 13 9 11 17 4 0 0   15 1.87 3.98 166.5 -1.36 -0.27 19.9 85 11 7 8 15 1 4 0   16 1.36 2.82 170.5 -1.36 -0.20 18.2 86 13 6 9 23 4 4 0   17 1.19 1.57 197.6 -0.60 -0.15 13.0 81 13 8 9 23 8 2 0   18 1.19 3.94 213.5 -1.60 -0.31 20.5 81 17 12 14 19 6 3 0   19 1.19 3.89 223.2 -2.07 -0.37 28.0 80 20 17 10 12 5 3 0   20 1.43 4.40 229.7 -1.46 -0.28 19.1 81 20 15 15 19 9 1 0   21 1.24 3.91 237.1 -1.72 -0.25 24.2 79 21 14 9 19 5 4 0   22 1.60 1.74 237.7 -1.50 -0.30 20.4 82 17 14 10 15 5 3 0   23 1.19 3.96 237.7 -1.68 -0.29 20.6 82 19 14 15 22 6 3 0   24 1.24 3.91 247.3 -2.12 -0.35 27.4 80 21 19 11 15 5 3 0   25 2.14 3.41 249.1 -1.44 -0.32 19.7 81 17 11 10 21 4 4 0   26 1.37 3.86 253.9 -1.54 -0.28 19.0 81 22 17 16 21 9 1 0   27 1.31 1.43 309.9 -1.30 -0.26 17.5 80 23 17 14 28 13 3 0   28 1.43 3.75 344.2 -1.59 -0.31 21.1 83 26 16 18 24 8 5 0   29 1.84 1.88 27.6 -1.34 -0.74 15.7 81 4 4 0 1 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.