PDBsum entry 5jw1

Pore analysis for: 5jw1 calculated with

MOLE 2.0

PDB id

5jw1

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

10 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.19

1.23

26.3

-1.21

-0.28

13.4

86

2

2

2

2

1

0

0

2

1.57

1.78

31.1

0.11

-0.15

9.0

89

2

2

3

8

1

0

0

CEL 602 A

3

1.65

1.72

32.6

-1.07

-0.40

11.3

75

2

1

5

2

1

1

2

4

1.20

1.24

36.3

-0.99

-0.36

10.6

75

2

5

3

2

2

2

1

5

1.25

1.26

36.8

-1.80

-0.37

19.6

75

3

3

2

2

2

2

0

6

1.25

1.25

38.2

-1.22

-0.49

14.0

78

2

3

5

2

1

2

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.