PDBsum entry 5jtw Go to PDB code:  Tunnel analysis for: 5jtw calculated with MOLE 2.0 PDB id 5jtw Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.99 23.3 1.79 0.55 5.8 82 1 2 1 9 3 0 0   2 1.19 1.43 21.8 1.11 0.48 6.1 78 2 0 0 10 2 0 0   3 1.25 1.42 16.5 -2.66 -0.56 26.3 75 3 1 1 0 1 1 0   4 1.24 1.42 23.8 -2.30 -0.48 25.8 78 4 2 0 1 1 2 0   5 1.51 1.51 15.1 -2.13 -0.68 27.4 83 4 3 3 3 0 1 0   6 1.12 1.30 18.9 -0.41 0.07 6.1 71 2 0 2 6 2 2 0   7 1.17 1.26 24.2 0.23 0.06 12.3 85 1 1 1 7 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.