PDBsum entry 5jms Go to PDB code:  Pore analysis for: 5jms calculated with MOLE 2.0 PDB id 5jms Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.63 3.14 30.5 -1.80 -0.47 25.8 84 9 3 3 3 0 0 0  6LP 601 A 2 3.17 3.32 31.9 -2.09 -0.41 30.4 82 6 2 1 3 0 0 0  6LP 601 A 3 1.70 1.88 39.8 0.23 -0.07 13.3 77 5 4 0 11 0 0 0  6LP 601 A 4 1.07 1.46 72.3 0.04 -0.08 16.2 78 6 6 1 16 1 0 0  6LP 601 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.