PDBsum entry 5jm6 Go to PDB code:  Pore analysis for: 5jm6 calculated with MOLE 2.0 PDB id 5jm6 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.77 1.77 27.4 -1.63 -0.58 19.7 83 2 2 1 1 0 2 0   2 1.55 1.60 34.2 -0.74 -0.31 14.5 85 2 3 1 4 1 2 0   3 1.22 1.55 54.9 -0.08 -0.25 7.7 80 3 2 0 3 0 5 0   4 1.30 1.30 58.5 -0.19 -0.21 11.6 78 2 4 2 6 3 3 0   5 1.29 1.39 62.1 -1.35 -0.44 20.4 83 5 6 1 6 4 1 0   6 1.60 1.60 85.9 -1.51 -0.48 18.8 81 3 6 1 3 0 4 0   7 1.32 1.43 89.8 -1.53 -0.34 25.9 84 9 11 1 7 4 1 0   8 1.16 1.44 103.7 -1.03 -0.27 21.6 78 9 10 1 10 6 3 0   9 1.85 3.21 115.5 -1.18 -0.20 21.9 81 9 10 3 8 4 4 1   10 1.23 1.43 123.5 -0.97 -0.22 19.3 80 9 8 3 10 5 5 0   11 1.22 1.28 127.3 -1.08 -0.26 20.4 83 8 13 2 11 3 2 0   12 1.59 4.95 150.8 -0.87 -0.20 19.4 80 9 9 4 10 3 4 1   13 1.33 1.53 165.0 -0.84 -0.21 18.0 79 10 9 3 10 3 8 1   14 1.52 1.65 177.8 -1.29 -0.29 17.1 82 13 11 4 7 1 10 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.