PDBsum entry 5jjy Go to PDB code:  Tunnel analysis for: 5jjy calculated with MOLE 2.0 PDB id 5jjy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 3.03 20.7 -0.67 0.50 9.5 62 2 0 1 3 9 0 1  SAH 1804 A 2 1.32 2.92 22.7 -0.84 0.20 9.3 72 4 0 2 5 6 0 0  SAH 1804 A 3 1.48 1.48 15.3 0.01 0.30 15.6 75 2 1 1 3 0 0 2   4 1.28 2.57 18.2 -1.03 -0.19 16.6 77 2 3 0 1 2 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.