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PDBsum entry 5j89

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Immune system PDB id
5j89
Contents
Protein chains
125 a.a.
Ligands
6GX ×2
EDO
Waters ×208

References listed in PDB file
Key reference
Title Structural basis for small molecule targeting of the programmed death ligand 1 (pd-L1).
Authors K.M.Zak, P.Grudnik, K.Guzik, B.J.Zieba, B.Musielak, A.Dömling, G.Dubin, T.A.Holak.
Ref. Oncotarget, 2016, 7, 30323-30335. [DOI no: 10.18632/oncotarget.8730]
PubMed id 27083005
Abstract
Targeting the PD-1/PD-L1 immunologic checkpoint with monoclonal antibodies has provided unprecedented results in cancer treatment in the recent years. Development of chemical inhibitors for this pathway lags the antibody development because of insufficient structural information. The first nonpeptidic chemical inhibitors that target the PD-1/PD-L1 interaction have only been recently disclosed by Bristol-Myers Squibb. Here, we show that these small-molecule compounds bind directly to PD-L1 and that they potently block PD-1 binding. Structural studies reveal a dimeric protein complex with a single small molecule which stabilizes the dimer thus occluding the PD-1 interaction surface of PD-L1s. The small-molecule interaction "hot spots" on PD-L1 surfaces suggest approaches for the PD-1/PD-L1 antagonist drug discovery.
PROCHECK
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