PDBsum entry 5j4e Go to PDB code:  Pore analysis for: 5j4e calculated with MOLE 2.0 PDB id 5j4e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.65 3.18 28.1 -2.66 -0.61 29.0 81 8 4 3 2 0 0 0   2 2.25 2.54 31.0 -1.81 -0.35 24.3 80 6 4 2 6 1 0 0   3 2.25 2.54 37.6 -1.71 -0.28 30.2 79 7 6 2 6 1 0 0   4 2.35 3.36 45.5 -0.60 -0.01 16.0 82 7 4 2 8 1 0 0   5 2.12 3.48 59.7 -2.06 -0.26 25.5 74 5 5 2 2 3 0 0   6 1.84 1.84 61.5 -1.86 -0.24 23.3 73 4 5 1 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.