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PDBsum entry 5j3x

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protein metals Protein-protein interface(s) links
Ligase PDB id
5j3x

 

 

 

 

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Contents
Protein chains
(+ 0 more) 386 a.a.
Metals
_CA ×6
_ZN ×12
Waters ×94
PDB id:
5j3x
Name: Ligase
Title: Structure of c-cbl y371f
Structure: E3 ubiquitin-protein ligase cbl. Chain: a, b, c, d, e, f. Fragment: unp residues 47-435. Synonym: casitas b-lineage lymphoma proto-oncogene,proto-oncogenE C- cbl,ring finger protein 55,signal transduction protein cbl. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: cbl, cbl2, rnf55. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.82Å     R-factor:   0.215     R-free:   0.254
Authors: D.T.Huang,L.Buetow,H.Dou
Key ref: L.Buetow et al. (2016). Casitas B-lineage lymphoma linker helix mutations found in myeloproliferative neoplasms affect conformation. Bmc Biol, 14, 76. PubMed id: 27609087 DOI: 10.1186/s12915-016-0298-6
Date:
31-Mar-16     Release date:   21-Sep-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P22681  (CBL_HUMAN) -  E3 ubiquitin-protein ligase CBL from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
906 a.a.
386 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.3.2.27  - RING-type E3 ubiquitin transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6- ubiquitinyl-[acceptor protein]-L-lysine

 

 
DOI no: 10.1186/s12915-016-0298-6 Bmc Biol 14:76 (2016)
PubMed id: 27609087  
 
 
Casitas B-lineage lymphoma linker helix mutations found in myeloproliferative neoplasms affect conformation.
L.Buetow, G.Tria, S.F.Ahmed, A.Hock, H.Dou, G.J.Sibbet, D.I.Svergun, D.T.Huang.
 
  ABSTRACT  
 
No abstract given.

 

 

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