PDBsum entry 5iy0 Go to PDB code:  Pore analysis for: 5iy0 calculated with MOLE 2.0 PDB id 5iy0 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.85 4.23 29.6 -2.90 -0.35 37.2 79 7 2 1 2 0 0 0   2 2.19 2.23 32.1 -1.16 -0.42 22.7 85 5 5 3 3 1 0 0   3 3.29 3.40 34.2 -2.96 -0.41 36.3 80 6 2 1 2 0 0 0   4 1.38 2.43 40.8 -1.22 -0.24 25.5 80 5 4 2 3 1 1 0   5 1.95 2.11 41.6 -1.62 -0.37 25.4 85 6 4 2 3 1 0 0   6 1.50 1.74 42.4 -1.48 -0.14 28.6 82 7 3 2 3 1 0 0   7 1.93 2.05 43.3 -2.37 -0.27 35.2 83 8 2 1 2 1 0 0   8 2.90 3.05 45.3 -2.82 -0.49 35.5 82 10 3 2 2 0 0 0   9 1.37 2.90 48.2 -1.66 -0.21 30.3 80 6 4 2 3 1 1 0   10 1.95 2.11 49.0 -1.89 -0.26 29.5 85 7 4 2 3 1 0 0   11 3.84 3.93 50.5 -3.14 -0.37 39.8 78 9 2 1 2 0 0 0   12 2.62 2.62 50.5 -2.03 -0.51 26.6 85 5 5 4 3 0 1 0   13 2.12 2.19 54.5 -2.67 -0.60 33.7 81 7 6 4 2 0 0 0   14 2.60 2.60 63.7 -2.02 -0.46 26.7 84 8 6 4 4 0 1 0   15 2.11 2.18 64.2 -2.33 -0.51 31.8 81 9 6 4 4 0 0 0   16 2.90 3.04 65.9 -3.18 -0.52 39.9 79 14 2 2 0 1 0 0   17 1.37 2.49 71.0 -2.35 -0.38 34.6 81 11 7 3 3 1 1 0   18 1.38 2.98 75.7 -1.42 -0.23 27.2 79 8 6 3 6 2 1 0   19 1.36 2.76 78.0 -2.48 -0.35 36.3 80 12 7 3 3 2 1 0   20 1.43 2.70 79.5 -2.07 -0.41 30.6 79 11 4 2 3 1 1 0   21 1.35 2.71 79.9 -1.61 -0.44 23.6 81 10 7 4 5 2 1 0   22 1.41 3.04 85.9 -1.43 -0.20 27.5 78 8 7 3 6 2 2 0   23 1.40 2.84 88.3 -1.16 -0.17 25.1 79 8 7 3 6 2 2 0   24 3.69 4.77 90.4 -3.70 -0.50 45.1 78 15 5 2 0 1 0 0   25 1.55 1.79 111.8 -2.59 -0.35 36.6 77 15 5 2 3 1 0 0   26 1.33 2.26 117.6 -1.87 -0.29 31.1 79 15 10 4 6 3 2 0   27 1.41 3.09 120.2 -2.28 -0.42 34.5 79 14 10 4 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.