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PDBsum entry 5iy0

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protein metals Protein-protein interface(s) links
Replication DNA binding protein PDB id
5iy0

 

 

 

 

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Contents
Protein chains
(+ 0 more) 253 a.a.
Metals
_ZN ×6
PDB id:
5iy0
Name: Replication DNA binding protein
Title: Pfmcm n-terminal domain double hexamer
Structure: Cell division control protein 21. Chain: a, b, c, d, e, f. Fragment: n-terminal domain (unp residues 2-256). Engineered: yes
Source: Pyrococcus furiosus. Organism_taxid: 186497. Strain: atcc 43587 / dsm 3638 / jcm 8422 / vc1. Gene: pf0482. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
3.00Å     R-factor:   0.205     R-free:   0.223
Authors: M.Meagher,E.J.Enemark
Key ref: M.Meagher and E.J.Enemark (2016). Structure of a double hexamer of the Pyrococcus furiosus minichromosome maintenance protein N-terminal domain. Acta Crystallogr F Struct Biol Commun, 72, 545-551. PubMed id: 27380371 DOI: 10.1107/S2053230X1600858X
Date:
23-Mar-16     Release date:   13-Jul-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q8U3I4  (Q8U3I4_PYRFU) -  DNA helicase from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1049 a.a.
253 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.3.6.4.12  - Dna helicase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + H2O = ADP + phosphate + H+
ATP
+ H2O
= ADP
+ phosphate
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1107/S2053230X1600858X Acta Crystallogr F Struct Biol Commun 72:545-551 (2016)
PubMed id: 27380371  
 
 
Structure of a double hexamer of the Pyrococcus furiosus minichromosome maintenance protein N-terminal domain.
M.Meagher, E.J.Enemark.
 
  ABSTRACT  
 
The crystal structure of the N-terminal domain of the Pyrococcus furiosus minichromosome maintenance (MCM) protein as a double hexamer is described. The MCM complex is a ring-shaped helicase that unwinds DNA at the replication fork of eukaryotes and archaea. Prior to replication initiation, the MCM complex assembles as an inactive double hexamer at specific sites of DNA. The presented structure is highly consistent with previous MCM double-hexamer structures and shows two MCM hexamers with a head-to-head interaction mediated by the N-terminal domain. Minor differences include a diminished head-to-head interaction and a slightly reduced inter-hexamer rotation.
 

 

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