PDBsum entry 5ivw Go to PDB code:  Pore analysis for: 5ivw calculated with MOLE 2.0 PDB id 5ivw Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   25 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.61 28.4 -0.39 -0.35 10.6 84 3 0 1 2 1 0 0  DG 10 X DA 11 X DC 12 X DG 13 X DA 14 X DA 15 X DT 10 Y DT 13 Y DC 14 Y DG 15 Y 2 1.27 1.43 39.0 -0.50 -0.32 13.7 85 4 3 2 5 1 0 0   3 1.41 1.41 41.2 -1.09 -0.62 10.9 94 4 0 3 4 0 0 0  DA 11 X DC 12 X DG 13 X DT 5 Y DT 6 Y DT 13 Y DC 14 Y DG 15 Y 4 1.29 1.92 43.8 -1.61 -0.39 17.6 84 3 3 3 7 1 0 0   5 1.26 1.27 49.4 -0.40 -0.49 4.8 94 2 0 4 4 1 0 0  DG 10 X DA 11 X DC 12 X DG 13 X DA 14 X DA 15 X DT 5 Y DT 6 Y DT 10 Y 6 1.84 1.88 51.5 -0.76 -0.05 14.6 88 3 5 4 9 1 0 0   7 1.61 1.77 54.2 -0.78 -0.19 17.8 80 5 3 2 7 2 0 0   8 1.42 1.57 85.0 0.07 0.07 13.2 77 7 2 2 12 3 1 2   9 1.26 1.43 102.2 -0.67 -0.34 13.7 82 6 5 4 7 2 0 0  DA 9 X DG 10 X DA 11 X DC 12 X DG 13 X DA 14 X DA 15 X DT 10 Y DT 13 Y DC 14 Y DG 15 Y DG 16 Y 10 1.21 1.47 107.3 -0.94 -0.33 16.0 78 10 5 3 7 3 2 0  DA 9 X DG 10 X DA 11 X DT 13 Y DC 14 Y DG 15 Y DG 16 Y 11 1.58 1.58 107.3 -1.79 -0.58 21.6 88 8 7 7 3 3 1 0   12 1.24 1.24 113.9 -0.97 -0.37 14.2 83 9 5 7 9 2 2 0  DA 11 X DC 12 X DG 13 X DT 5 Y DT 6 Y DC 14 Y DG 15 Y DG 16 Y 13 1.28 1.40 115.3 -1.34 -0.42 20.3 85 8 8 5 7 2 1 0   14 1.43 1.45 131.5 -0.87 -0.32 13.2 87 11 6 10 15 3 1 1   15 1.34 1.34 141.6 -1.48 -0.41 22.5 85 6 8 3 8 3 1 0   16 1.33 1.30 170.3 -1.38 -0.41 19.2 86 12 10 7 9 5 2 0   17 1.27 1.23 219.0 -0.71 -0.23 15.9 82 12 13 7 16 6 2 0   18 1.30 1.40 261.7 -1.11 -0.27 18.4 84 14 13 9 13 4 3 1   19 1.28 1.48 31.8 2.28 0.86 0.9 82 0 0 1 11 2 1 0   20 1.29 1.30 35.8 -0.96 -0.29 13.3 74 3 2 2 4 2 1 0   21 1.42 1.53 41.5 -0.40 -0.37 12.1 77 4 3 2 8 1 0 0   22 1.28 1.80 46.8 1.20 0.44 8.1 70 3 1 1 10 2 1 0   23 1.18 1.27 47.8 0.12 0.00 9.0 66 4 1 1 6 4 1 1   24 1.31 1.93 48.3 1.59 0.71 4.9 69 3 0 0 14 5 2 1   25 1.32 1.31 74.6 -0.29 -0.35 10.1 82 4 3 6 10 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.