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PDBsum entry 5ikc
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Pore analysis for: 5ikc calculated with  MOLE 2.0
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PDB id
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5ikc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.35 |
3.68 |
32.4 |
-1.84 |
-0.55 |
19.5 |
81 |
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3 |
3 |
4 |
2 |
1 |
2 |
0 |
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2 |
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2.92 |
3.38 |
37.1 |
-1.07 |
-0.46 |
10.6 |
79 |
1 |
2 |
4 |
2 |
1 |
4 |
0 |
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3 |
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2.55 |
3.67 |
49.6 |
-2.29 |
-0.84 |
22.6 |
88 |
5 |
6 |
6 |
0 |
0 |
2 |
0 |
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4 |
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2.55 |
3.74 |
63.8 |
-1.82 |
-0.64 |
19.4 |
81 |
4 |
7 |
6 |
2 |
1 |
4 |
0 |
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5 |
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1.25 |
1.31 |
106.0 |
-1.99 |
-0.71 |
22.6 |
88 |
7 |
8 |
8 |
5 |
0 |
3 |
0 |
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6 |
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1.52 |
1.83 |
130.4 |
-1.57 |
-0.65 |
14.5 |
84 |
5 |
5 |
9 |
3 |
1 |
4 |
0 |
PCA 1 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program