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PDBsum entry 5ik7

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 5ik7 calculated with MOLE 2.0 PDB id
5ik7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.40 16.5 -0.43 -0.46 6.9 90 1 3 4 3 2 2 0  EDO 4006 B
2 1.04 1.03 43.5 -0.61 -0.46 8.4 84 3 4 6 6 4 3 1  EDO 4006 B EDO 4007 B
3 1.49 1.60 18.6 0.27 0.15 9.6 76 5 0 0 3 2 2 0  
4 1.30 2.79 16.2 0.57 0.10 7.0 74 4 0 0 4 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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