PDBsum entry 5ijb Go to PDB code:  Pore analysis for: 5ijb calculated with MOLE 2.0 PDB id 5ijb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.32 3.00 25.6 1.17 0.35 6.5 75 1 1 1 5 4 0 1   2 1.66 2.25 28.6 -1.86 -0.37 20.2 89 4 3 3 3 1 0 0  NAG 2 G 3 2.23 2.38 34.9 0.28 0.13 10.5 79 2 2 6 5 5 0 1   4 1.38 2.47 35.5 2.00 0.76 5.7 66 2 2 0 9 7 2 0   5 1.38 2.56 40.6 1.89 0.51 2.1 73 1 0 2 10 6 2 1   6 1.34 1.62 45.6 0.99 0.45 8.5 69 3 2 4 8 9 2 0   7 1.36 1.65 48.1 2.12 0.67 2.2 71 1 1 2 11 7 2 1   8 2.94 3.07 60.8 -3.05 -0.63 24.8 81 7 3 8 2 3 0 0   9 1.98 2.30 63.2 -0.59 -0.09 20.4 77 6 5 4 5 4 0 1   10 1.16 3.56 42.6 2.10 0.60 1.2 67 0 0 1 9 3 0 1   11 1.80 2.18 37.8 -3.26 -0.47 43.1 85 7 5 4 1 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.