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PDBsum entry 5iid
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Tunnel analysis for: 5iid calculated with  MOLE 2.0
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PDB id
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5iid
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.69 |
1.82 |
22.4 |
0.28 |
0.20 |
9.0 |
82 |
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0 |
4 |
3 |
5 |
2 |
1 |
0 |
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6BK 801 B
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2 |
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1.73 |
1.88 |
25.1 |
0.68 |
0.31 |
11.8 |
74 |
3 |
2 |
0 |
7 |
1 |
1 |
0 |
6BK 801 B
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3 |
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1.29 |
1.49 |
25.5 |
0.24 |
0.27 |
6.3 |
78 |
0 |
3 |
3 |
7 |
3 |
1 |
0 |
6BK 801 A
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4 |
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1.29 |
1.47 |
25.9 |
0.17 |
0.16 |
6.1 |
82 |
0 |
3 |
5 |
8 |
3 |
1 |
0 |
6BK 801 A
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5 |
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1.29 |
1.50 |
28.6 |
0.03 |
0.04 |
10.8 |
81 |
3 |
1 |
1 |
7 |
2 |
1 |
0 |
6BK 801 A
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6 |
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1.29 |
1.49 |
30.8 |
0.89 |
0.33 |
3.9 |
76 |
1 |
0 |
3 |
7 |
3 |
2 |
0 |
6BK 801 A
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7 |
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1.44 |
1.45 |
34.9 |
1.52 |
0.57 |
3.8 |
77 |
1 |
1 |
3 |
9 |
3 |
2 |
0 |
6BK 801 A 6BK 801 B
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8 |
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1.73 |
1.87 |
41.9 |
1.24 |
0.52 |
9.3 |
83 |
3 |
3 |
3 |
10 |
2 |
1 |
0 |
6BK 801 A 6BK 801 B
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9 |
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1.29 |
1.29 |
15.2 |
1.41 |
0.64 |
14.4 |
83 |
2 |
0 |
0 |
6 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program