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PDBsum entry 5iia

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protein ligands Protein-protein interface(s) links
Cell adhesion PDB id
5iia

 

 

 

 

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Contents
Protein chains
125 a.a.
107 a.a.
107 a.a.
Ligands
NAG ×8
Waters ×577
PDB id:
5iia
Name: Cell adhesion
Title: Crystal structure of red abalone egg verl repeat 3 in complex with sperm lysin at 1.7 a resolution (crystal form i)
Structure: Egg-lysin. Chain: a, c, e, g. Synonym: sperm-lysin. Engineered: yes. Vitelline envelope sperm lysin receptor. Chain: b, d, f, h. Fragment: unp residues 340-453. Engineered: yes
Source: Haliotis rufescens. California red abalone. Organism_taxid: 6454. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: hek-293s. Gene: verl.
Resolution:
1.70Å     R-factor:   0.178     R-free:   0.204
Authors: H.Sadat Al-Hosseini,I.Raj,K.Nishimura,D.De Sanctis,L.Jovine
Date:
01-Mar-16     Release date:   14-Jun-17    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P04552  (ELYS_HALRU) -  Egg-lysin from Haliotis rufescens
Seq:
Struc:
154 a.a.
125 a.a.
Protein chain
Pfam   ArchSchema ?
Q8WR62  (VERL_HALRU) -  Vitelline envelope sperm lysin receptor from Haliotis rufescens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
3722 a.a.
107 a.a.*
Protein chains
Pfam   ArchSchema ?
Q8WR62  (VERL_HALRU) -  Vitelline envelope sperm lysin receptor from Haliotis rufescens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
3722 a.a.
107 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 5 residue positions (black crosses)

 

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