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PDBsum entry 5ibm
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Pore analysis for: 5ibm calculated with  MOLE 2.0
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PDB id
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5ibm
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.82 |
2.45 |
30.3 |
-1.67 |
-0.70 |
16.0 |
83 |
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2 |
2 |
3 |
0 |
2 |
1 |
0 |
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2 |
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1.83 |
3.12 |
32.3 |
-1.94 |
-0.78 |
19.9 |
85 |
4 |
4 |
2 |
0 |
0 |
1 |
0 |
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3 |
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2.21 |
2.36 |
34.9 |
-2.44 |
-0.58 |
32.2 |
80 |
4 |
6 |
3 |
3 |
1 |
0 |
0 |
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4 |
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3.55 |
5.07 |
36.1 |
-2.76 |
-0.48 |
33.0 |
85 |
4 |
6 |
5 |
3 |
0 |
0 |
0 |
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5 |
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2.21 |
2.36 |
39.9 |
-2.49 |
-0.60 |
33.2 |
84 |
5 |
7 |
4 |
3 |
1 |
0 |
0 |
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6 |
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2.84 |
3.37 |
41.5 |
-2.67 |
-0.67 |
35.2 |
84 |
5 |
6 |
4 |
3 |
1 |
0 |
0 |
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7 |
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2.83 |
4.10 |
42.1 |
-2.63 |
-0.60 |
37.4 |
81 |
5 |
8 |
3 |
3 |
1 |
0 |
0 |
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8 |
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1.36 |
3.39 |
72.1 |
-1.92 |
-0.51 |
18.9 |
87 |
6 |
4 |
3 |
0 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program