PDBsum entry 5i99 Go to PDB code:  Tunnel analysis for: 5i99 calculated with MOLE 2.0 PDB id 5i99 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.14 15.8 -0.44 -0.39 11.1 90 1 2 1 3 0 0 0   2 1.12 1.12 16.4 -0.17 -0.19 12.9 92 1 2 1 3 0 0 0   3 1.21 1.21 16.9 -0.84 0.13 17.9 62 2 1 0 2 2 0 1   4 1.21 1.21 20.0 -0.94 0.22 18.2 59 2 2 0 1 3 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.