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PDBsum entry 5hrx

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protein ligands Protein-protein interface(s) links
Transcription PDB id
5hrx

 

 

 

 

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Contents
Protein chains
110 a.a.
Ligands
EDO ×2
64F ×2
Waters ×75
PDB id:
5hrx
Name: Transcription
Title: Crystal structure of the fifth bromodomain of human pb1 in complex with 1-butylisochromeno[3,4-c]pyrazol-5(2h)-one) compound
Structure: Protein polybromo-1. Chain: a, b. Fragment: unp residues 613-734. Synonym: hpb1,brg1-associated factor 180,baf180,polybromo-1d,pb1 fifth bromodomain. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: pbrm1, baf180, pb1. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.73Å     R-factor:   0.216     R-free:   0.254
Authors: C.Tallant,V.Myrianthopoulos,N.Gaboriaud-Kolar,J.A.Newman,S.Picaud, F.Von Delft,C.H.Arrowsmith,A.M.Edwards,C.Bountra,E.Mikros,S.Knapp
Key ref: V.Myrianthopoulos et al. (2016). Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis. J Med Chem, 59, 8787-8803. PubMed id: 27617704 DOI: 10.1021/acs.jmedchem.6b00355
Date:
24-Jan-16     Release date:   12-Oct-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q86U86  (PB1_HUMAN) -  Protein polybromo-1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1689 a.a.
110 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
DOI no: 10.1021/acs.jmedchem.6b00355 J Med Chem 59:8787-8803 (2016)
PubMed id: 27617704  
 
 
Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis.
V.Myrianthopoulos, N.Gaboriaud-Kolar, C.Tallant, M.L.Hall, S.Grigoriou, P.M.Brownlee, O.Fedorov, C.Rogers, D.Heidenreich, M.Wanior, N.Drosos, N.Mexia, P.Savitsky, T.Bagratuni, E.Kastritis, E.Terpos, P.Filippakopoulos, S.Müller, A.L.Skaltsounis, J.A.Downs, S.Knapp, E.Mikros.
 
  ABSTRACT  
 
No abstract given.

 

 

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