PDBsum entry 5h1l Go to PDB code:  Tunnel analysis for: 5h1l calculated with MOLE 2.0 PDB id 5h1l Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.38 24.7 -1.05 -0.32 13.0 86 4 0 2 2 0 3 1   2 1.29 1.57 22.7 -0.39 -0.40 7.6 87 2 0 3 4 0 2 1   3 1.30 1.53 24.1 -0.42 -0.56 8.4 91 2 1 3 4 0 0 1   4 1.41 1.41 27.4 -0.68 -0.38 6.5 80 1 1 2 1 2 0 1  U 6 B G 7 B 5 1.50 4.01 18.4 -0.51 -0.01 17.7 81 1 2 2 3 2 1 0   6 0.99 3.08 18.8 -0.30 0.09 8.6 82 1 2 2 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.