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PDBsum entry 5h1c

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Top Page protein dna_rna ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5h1c calculated with MOLE 2.0 PDB id
5h1c
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.61 41.4 0.30 0.45 12.8 79 2 3 3 4 2 0 0  
2 1.14 1.61 60.2 -0.68 0.13 23.2 79 6 6 2 8 4 0 0  
3 1.27 1.50 84.4 -1.14 -0.22 23.1 83 9 7 1 10 2 0 0  DA 8 E DA 9 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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