PDBsum entry 5gvs Go to PDB code:  Tunnel analysis for: 5gvs calculated with MOLE 2.0 PDB id 5gvs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.69 21.5 -0.66 -0.44 12.7 72 3 0 0 1 2 0 0   2 1.33 1.67 23.0 -1.74 -0.48 18.9 69 3 0 1 0 3 0 0   3 1.77 1.77 19.4 -0.78 -0.07 8.7 73 2 1 1 2 1 1 0   4 1.71 2.17 23.8 -0.90 0.07 12.6 75 4 1 1 2 1 1 0   5 1.51 2.51 17.1 2.21 0.68 1.3 72 0 0 0 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.