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PDBsum entry 5gs0
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Pore analysis for: 5gs0 calculated with MOLE 2.0
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PDB id
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5gs0
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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21 pores,
coloured by radius |
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14 pores,
coloured by radius
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14 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.80 |
1.83 |
28.3 |
-1.33 |
-0.60 |
18.3 |
84 |
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2 |
4 |
2 |
0 |
1 |
1 |
0 |
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2 |
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3.61 |
3.61 |
29.4 |
-2.03 |
-0.51 |
18.6 |
88 |
2 |
1 |
1 |
0 |
0 |
2 |
0 |
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3 |
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2.38 |
2.38 |
29.4 |
-1.43 |
-0.36 |
8.8 |
83 |
2 |
1 |
1 |
1 |
0 |
3 |
0 |
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4 |
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1.79 |
1.84 |
39.1 |
-1.28 |
-0.67 |
16.7 |
87 |
3 |
4 |
3 |
0 |
1 |
1 |
0 |
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5 |
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1.41 |
1.57 |
68.2 |
-1.60 |
-0.33 |
16.4 |
83 |
6 |
4 |
6 |
3 |
3 |
4 |
0 |
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6 |
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1.41 |
1.58 |
72.2 |
-1.77 |
-0.41 |
17.2 |
84 |
5 |
6 |
6 |
3 |
2 |
2 |
0 |
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7 |
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2.54 |
2.86 |
73.1 |
-1.14 |
-0.70 |
9.6 |
98 |
5 |
1 |
9 |
2 |
0 |
0 |
0 |
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8 |
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1.33 |
3.10 |
82.2 |
-2.50 |
-0.54 |
21.6 |
84 |
6 |
4 |
12 |
1 |
2 |
1 |
0 |
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9 |
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1.14 |
3.19 |
86.7 |
-2.15 |
-0.54 |
22.5 |
84 |
9 |
4 |
9 |
2 |
0 |
4 |
0 |
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10 |
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1.31 |
3.01 |
99.5 |
-2.27 |
-0.57 |
23.7 |
81 |
9 |
6 |
9 |
2 |
1 |
3 |
0 |
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11 |
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1.41 |
1.58 |
102.6 |
-1.78 |
-0.41 |
16.9 |
86 |
8 |
4 |
11 |
2 |
2 |
4 |
0 |
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12 |
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1.28 |
3.02 |
105.3 |
-2.52 |
-0.76 |
16.5 |
89 |
7 |
3 |
15 |
2 |
0 |
1 |
0 |
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13 |
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1.24 |
3.14 |
121.5 |
-2.34 |
-0.60 |
23.1 |
87 |
11 |
4 |
15 |
1 |
0 |
4 |
0 |
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14 |
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1.37 |
1.55 |
34.0 |
-2.15 |
-0.43 |
21.1 |
88 |
6 |
1 |
6 |
3 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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