PDBsum entry 5gai Go to PDB code:  Pore analysis for: 5gai calculated with MOLE 2.0 PDB id 5gai Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   28 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.98 2.81 38.6 -2.11 -0.59 25.0 75 4 6 3 1 2 2 0   2 1.42 2.68 55.7 -2.17 -0.59 33.7 82 8 12 0 5 0 1 0   3 1.53 4.03 58.2 -1.49 -0.44 17.8 79 3 7 6 4 3 3 0   4 1.47 3.61 59.7 -1.81 -0.43 27.9 78 5 10 2 5 2 2 0   5 1.34 1.62 69.6 -1.67 -0.26 26.7 78 7 13 4 7 3 1 0   6 1.91 4.03 70.7 -1.78 -0.49 27.0 78 5 13 2 5 4 3 0   7 1.21 1.94 91.1 -2.28 -0.60 27.8 81 7 12 5 2 0 4 0   8 1.26 1.57 100.8 -1.53 -0.30 19.2 79 8 6 10 14 3 2 0   9 2.60 3.29 106.7 -1.60 -0.36 9.2 83 6 1 17 10 4 1 0   10 1.29 3.87 110.6 -1.63 -0.35 23.2 80 8 15 10 13 2 3 0   11 1.16 1.29 134.5 -1.50 -0.35 19.6 78 10 15 8 9 3 4 0   12 1.94 2.78 152.0 -1.11 -0.27 17.6 81 6 11 10 14 3 4 0   13 1.25 1.62 195.3 -1.72 -0.37 18.8 80 14 14 18 17 8 2 0   14 1.44 1.49 261.6 -1.63 -0.48 20.3 80 15 18 13 15 3 8 0   15 1.25 1.49 260.7 -1.59 -0.39 17.0 80 17 17 23 20 8 5 0   16 1.21 1.28 271.4 -1.85 -0.53 23.2 83 17 23 12 13 4 5 0   17 1.32 2.71 341.9 -1.71 -0.44 21.8 78 19 23 14 18 6 9 0   18 1.57 3.01 25.5 -1.71 -0.22 19.9 76 4 3 1 1 2 2 0   19 1.41 1.64 55.8 -0.87 -0.09 19.7 82 3 6 2 9 3 1 0   20 1.20 1.52 26.1 -0.85 -0.57 13.6 86 2 2 3 5 0 1 0   21 1.26 1.71 30.4 -1.30 -0.70 18.2 83 3 6 1 2 1 0 0   22 1.76 1.92 82.4 -0.65 0.18 14.3 76 6 1 6 2 5 0 1   23 1.21 1.23 28.7 -2.00 -0.40 27.0 75 5 4 2 1 2 3 0   24 1.47 1.75 31.1 0.20 -0.14 13.2 91 1 3 2 8 1 0 0   25 1.25 1.50 71.4 0.21 -0.25 11.6 86 0 6 0 10 1 0 0   26 1.29 1.90 47.3 -0.48 -0.21 14.3 75 2 2 0 2 1 3 0   27 1.31 1.71 27.7 0.56 0.31 14.6 75 3 1 0 7 1 0 0   28 1.15 1.34 49.9 -0.99 0.01 8.5 72 3 3 4 2 6 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.